PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.52XKK
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 316aa    MW: 34924.7 Da    PI: 4.5864
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.52XKKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.69e-08184228655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ +r+RR+ri + +  L +llP++        s a iL   ++++k+Lq
  Araip.52XKK 184 KASDRQRRQRIADNLKALHDLLPNQ-----AEGSQAYILDDIIDHVKYLQ 228
                  7889********************6.....479****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.325178227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.94E-7179232No hitNo description
Gene3DG3DSA:4.10.280.101.7E-9183241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-10183242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-5184233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-5184228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MESKMSFTSG GTSCHVTGSA AEDDSNMQDA VATEEGSGSQ WSFLPKPSHH NYVQYLTESS  60
NYLPKTEDMI GSNYAALGFG NDGNGTNMNF FCNDPGKAYA FKTEVHSSNE VDIGKQVGYW  120
RPAESEVQQE AMQFESTQHH HPLYPESPAS WTPEAIGDNP NVSRLDPSVL AGTPSFLPKP  180
ARQKASDRQR RQRIADNLKA LHDLLPNQAE GSQAYILDDI IDHVKYLQLQ LKELSGSRLQ  240
AESTAIPLVF HEGYGHYIDQ QKLNEPLEEM MGKLLEENPA SASQLLENNG LVLLPMELVQ  300
DLHQSMQIFG NGNALV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181190RQKASDRQRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016207404.10.0PREDICTED: transcription factor bHLH7-like
TrEMBLV7BFG91e-112V7BFG9_PHAVU; Uncharacterized protein
STRINGGLYMA02G16745.11e-104(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF121642426
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.11e-20LJRHL1-like 2